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6T06

Crystal structure of YTHDC1 with fragment 19 (DHU_DC1_045)

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSLS BEAMLINE X06DA
Synchrotron siteSLS
BeamlineX06DA
Temperature [K]100
Detector technologyPIXEL
Collection date2018-02-12
DetectorDECTRIS PILATUS 2M-F
Wavelength(s)1
Spacegroup nameP 1 21 1
Unit cell lengths39.364, 102.844, 42.033
Unit cell angles90.00, 106.04, 90.00
Refinement procedure
Resolution40.400 - 2.400
R-factor0.1806
Rwork0.176
R-free0.25860
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)4r3h
RMSD bond length0.007
RMSD bond angle0.957
Data reduction softwareXDS
Phasing softwarePHASER
Refinement softwarePHENIX (1.16_3549)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]40.5002.540
High resolution limit [Å]2.4002.400
Number of reflections115671687
<I/σ(I)>23.15
Completeness [%]91.1
Redundancy2.99
CC(1/2)0.9990.989
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP29525% PEG3350, 0.2M Ammonium Sulphate, 0.1M bis-tris, pH 6.5

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