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6SZL

Crystal structure of YTHDC1 with fragment 7 (DHU_DC1_021)

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSLS BEAMLINE X06DA
Synchrotron siteSLS
BeamlineX06DA
Temperature [K]100
Detector technologyPIXEL
Collection date2017-12-03
DetectorDECTRIS PILATUS 2M-F
Wavelength(s)1
Spacegroup nameP 1 21 1
Unit cell lengths39.697, 103.836, 42.189
Unit cell angles90.00, 105.58, 90.00
Refinement procedure
Resolution40.640 - 1.450
R-factor0.194
Rwork0.193
R-free0.21550
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)4r3h
RMSD bond length0.006
RMSD bond angle0.790
Data reduction softwareXDS
Phasing softwarePHASER
Refinement softwarePHENIX (1.16_3549)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]40.6401.530
High resolution limit [Å]1.4501.450
Number of reflections563868373
<I/σ(I)>12.44
Completeness [%]96.4
Redundancy3.32
CC(1/2)0.9980.818
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP29525% PEG3350, 0.2M Ammonium Sulphate, 0.1M bis-tris, pH 6.5

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PDB entries from 2024-08-07

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