6SXT
GH54 a-l-arabinofuranosidase soaked with aziridine inhibitor
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I04 |
Synchrotron site | Diamond |
Beamline | I04 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2019-07-01 |
Detector | DECTRIS EIGER2 X 16M |
Wavelength(s) | 0.9795 |
Spacegroup name | H 3 2 |
Unit cell lengths | 112.232, 112.232, 342.730 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 84.687 - 1.466 |
Rwork | 0.157 |
R-free | 0.17910 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1wd3 |
RMSD bond length | 0.016 |
RMSD bond angle | 1.942 |
Data reduction software | XDS (Mar 15, 2019) |
Data scaling software | Aimless (0.7.4) |
Phasing software | PHASER (2.8.3) |
Refinement software | REFMAC (5.8.0253) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 85.540 | 1.491 |
High resolution limit [Å] | 1.466 | 1.466 |
Rmerge | 0.105 | 2.980 |
Rmeas | 0.109 | 3.130 |
Rpim | 0.031 | 0.940 |
Number of reflections | 141273 | 6968 |
<I/σ(I)> | 13 | 0.7 |
Completeness [%] | 99.3 | 98.5 |
Redundancy | 12.4 | 10.7 |
CC(1/2) | 0.999 | 0.367 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 4.5 | 293 | 2:1 protein:well solution. 0.1 M pH 4.5 sodium acetate buffer, 60% PEG400, 0.3 M (NH4)2SO4 |