6SUC
Human PTPRU D1 domain, oxidised form
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I03 |
Synchrotron site | Diamond |
Beamline | I03 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2018-06-24 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.9796 |
Spacegroup name | C 2 2 21 |
Unit cell lengths | 62.090, 107.920, 89.280 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 46.190 - 1.970 |
R-factor | 0.2154 |
Rwork | 0.214 |
R-free | 0.24520 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6sub |
RMSD bond length | 0.005 |
RMSD bond angle | 0.863 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Refinement software | PHENIX (1.16_3549) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 89.280 | 2.000 |
High resolution limit [Å] | 1.970 | 1.970 |
Rmerge | 0.128 | 1.061 |
Rpim | 0.055 | 0.458 |
Number of reflections | 21600 | 1071 |
<I/σ(I)> | 9 | 1.6 |
Completeness [%] | 100.0 | 100 |
Redundancy | 6.4 | 6.3 |
CC(1/2) | 0.995 | 0.527 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 293 | 0.1 M BICINE, pH 9, 1 M lithium chloride, 20% (w/v) polyethylene glycol 6000 |