6SUB
Human PTPRU D1 domain, reduced form
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I04 |
Synchrotron site | Diamond |
Beamline | I04 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2018-05-22 |
Detector | DECTRIS PILATUS 6M-F |
Wavelength(s) | 0.9795 |
Spacegroup name | C 2 2 21 |
Unit cell lengths | 61.821, 107.887, 88.328 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 53.970 - 1.720 |
R-factor | 0.1828 |
Rwork | 0.182 |
R-free | 0.20140 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2c7s |
RMSD bond length | 0.012 |
RMSD bond angle | 1.109 |
Data scaling software | Aimless |
Refinement software | PHENIX (1.16_3549) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 53.970 | 1.750 |
High resolution limit [Å] | 1.720 | 1.720 |
Rmerge | 0.148 | 0.904 |
Rpim | 0.043 | 0.284 |
Number of reflections | 31768 | 1534 |
<I/σ(I)> | 9.7 | |
Completeness [%] | 100.0 | 99 |
Redundancy | 12.9 | 11 |
CC(1/2) | 0.998 | 0.501 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 293 | 0.1 M BICINE, pH 9, 1 M lithium chloride, 20% (w/v) polyethylene glycol 6000 |