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6SRU

Structure of Ig-like V-type domian of mouse Programmed cell death 1 ligand 1 (PD-L1)

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsESRF BEAMLINE ID23-1
Synchrotron siteESRF
BeamlineID23-1
Temperature [K]100
Detector technologyPIXEL
Collection date2018-09-30
DetectorDECTRIS PILATUS 6M
Wavelength(s)0.978631
Spacegroup nameP 1 21 1
Unit cell lengths73.920, 107.715, 79.531
Unit cell angles90.00, 99.15, 90.00
Refinement procedure
Resolution49.664 - 2.532
R-factor0.2302
Rwork0.228
R-free0.27910
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)5c3t
Data reduction softwareXDS
Data scaling softwareXSCALE
Phasing softwarePHASER
Refinement softwarePHENIX (1.15.2_3472)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]49.6642.620
High resolution limit [Å]2.5302.530
Rmerge0.0610.826
Number of reflections386223645
<I/σ(I)>10.8
Completeness [%]94.1
Redundancy2.6
CC(1/2)0.9980.567
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP2930.2 M ammonium sulfate, 0.1 M Tris pH 7.5, 20% PEG 5000 MME

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