6SRD
Structure of Rex8A from Paenibacillus barcinonensis complexed with xylose.
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ALBA BEAMLINE XALOC |
Synchrotron site | ALBA |
Beamline | XALOC |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2015-07-23 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 1.041910 |
Spacegroup name | P 1 |
Unit cell lengths | 51.566, 59.153, 79.534 |
Unit cell angles | 87.83, 77.98, 74.33 |
Refinement procedure
Resolution | 48.630 - 1.930 |
R-factor | 0.1909 |
Rwork | 0.189 |
R-free | 0.22860 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1wu4 |
RMSD bond length | 0.005 |
RMSD bond angle | 1.418 |
Data reduction software | XDS |
Data scaling software | Aimless (7.0.042) |
Phasing software | MOLREP (7.0.042) |
Refinement software | REFMAC (5.8.0238) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 48.630 | 1.980 |
High resolution limit [Å] | 1.930 | 1.930 |
Rmerge | 0.125 | 0.723 |
Rmeas | 0.148 | 0.879 |
Rpim | 0.078 | 0.489 |
Number of reflections | 64154 | 4213 |
<I/σ(I)> | 7.2 | 2 |
Completeness [%] | 96.4 | 93.2 |
Redundancy | 3.5 | 3.1 |
CC(1/2) | 0.992 | 0.663 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 8 | 291 | 23% PEG 6K, 0.1 M Tris pH 8.0, 0.2 M NaCl, 0.01 M Hexammine cobalt (III) chrloride. Soaking experiment in the precipitant solution supplemented with 50 mM xylose. Cryoprotectan solution consisting of mother liquor plus 25% (v/v) glycerol. |