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6SPV

Crystal structure of PDZ1-2 from PSD-95

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsDIAMOND BEAMLINE I04
Synchrotron siteDiamond
BeamlineI04
Temperature [K]80
Detector technologyPIXEL
Collection date2014-07-15
DetectorDECTRIS PILATUS 2M
Wavelength(s)0.920
Spacegroup nameI 41
Unit cell lengths50.380, 50.380, 178.270
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution48.480 - 2.040
Rwork0.224
R-free0.25970
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)3rl7 3rl8
RMSD bond length0.006
RMSD bond angle0.996
Data reduction softwarexia2
Data scaling softwareSCALA
Phasing softwarePHASER
Refinement softwareREFMAC (5.8.0073 2014/05/25)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]48.4802.090
High resolution limit [Å]2.0402.040
Rmerge0.0500.547
Number of reflections140155594
<I/σ(I)>24.42.8
Completeness [%]99.497.6
Redundancy11.15.5
CC(1/2)0.9990.851
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP6.52770.2 M calcium acetate; 0.1 M sodium cacodylate; 40% v/v PEG 400

238895

PDB entries from 2025-07-16

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