6SHD
Structure of the GH76A alpha-1,6-mannanase from Salegentibacter sp. HEL1_6
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | PETRA III, DESY BEAMLINE P11 |
| Synchrotron site | PETRA III, DESY |
| Beamline | P11 |
| Temperature [K] | 100 |
| Detector technology | PIXEL |
| Collection date | 2018-10-27 |
| Detector | DECTRIS EIGER X 16M |
| Wavelength(s) | 0.9763 |
| Spacegroup name | I 1 2 1 |
| Unit cell lengths | 187.261, 37.507, 187.457 |
| Unit cell angles | 90.00, 100.95, 90.00 |
Refinement procedure
| Resolution | 55.091 - 2.000 |
| R-factor | 0.1471 |
| Rwork | 0.146 |
| R-free | 0.20200 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 3k7x |
| Data reduction software | XDS |
| Data scaling software | Aimless (0.7.3) |
| Phasing software | PHASER |
| Refinement software | PHENIX (1.14_3260) |
Data quality characteristics
| Overall | Inner shell | Outer shell | |
| Low resolution limit [Å] | 92.020 | 92.020 | 2.040 |
| High resolution limit [Å] | 2.000 | 10.770 | 2.000 |
| Rmerge | 0.100 | 0.058 | 0.845 |
| Rmeas | 0.108 | 0.064 | 0.915 |
| Rpim | 0.042 | 0.027 | 0.346 |
| Total number of observations | 574248 | 3363 | 30691 |
| Number of reflections | 87258 | 630 | 4422 |
| <I/σ(I)> | 11.3 | 24.6 | 2.6 |
| Completeness [%] | 99.4 | 96.7 | 99.8 |
| Redundancy | 6.6 | 5.3 | 6.9 |
| CC(1/2) | 0.997 | 0.994 | 0.774 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, SITTING DROP | 8 | 289 | 0.2 M Magnesium chloride hexahydrate 0.1 M Sodium acetate pH 5.0 20 % w/v PEG 6000 |






