6SDU
Xyloglucanase domain of NopAA, a type three effector from Sinorhizobium fredii in complex with cellobiose
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE ID23-2 |
Synchrotron site | ESRF |
Beamline | ID23-2 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2016-04-18 |
Detector | DECTRIS PILATUS3 2M |
Wavelength(s) | 0.873 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 135.408, 108.319, 84.706 |
Unit cell angles | 90.00, 113.11, 90.00 |
Refinement procedure
Resolution | 44.470 - 2.200 |
R-factor | 0.1824 |
Rwork | 0.181 |
R-free | 0.21450 |
Structure solution method | MOLECULAR REPLACEMENT |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | PHENIX (1.13_2998) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 44.470 | 44.470 | 2.340 |
High resolution limit [Å] | 2.190 | 6.150 | 2.190 |
Rmerge | 0.142 | 0.049 | 0.953 |
Rmeas | 0.163 | 0.056 | 1.095 |
Total number of observations | 241563 | ||
Number of reflections | 57796 | 2681 | 10425 |
<I/σ(I)> | 7.59 | 23.59 | 1.33 |
Completeness [%] | 99.7 | 99.1 | 99.8 |
Redundancy | 4.18 | 4.2 | 4.141 |
CC(1/2) | 0.993 | 0.997 | 0.471 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 8.5 | 293 | Sodium acetate 20mM pH 4.5, 4M Sodium formate, 0.1M Tris pH 8.5 |