6SD0
Structure of beta-galactosidase from Thermotoga maritima.
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ALBA BEAMLINE XALOC |
Synchrotron site | ALBA |
Beamline | XALOC |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2014-06-04 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.979470 |
Spacegroup name | I 4 |
Unit cell lengths | 167.852, 167.852, 519.990 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 40.000 - 3.700 |
R-factor | 0.2432 |
Rwork | 0.241 |
R-free | 0.28550 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1dp0 |
RMSD bond length | 0.004 |
RMSD bond angle | 1.444 |
Data reduction software | XDS |
Data scaling software | Aimless (7.0.071) |
Phasing software | MOLREP |
Refinement software | REFMAC (5.8.0238) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 40.000 | 3.780 |
High resolution limit [Å] | 3.700 | 3.700 |
Rmerge | 0.165 | 1.740 |
Rmeas | 0.182 | 1.906 |
Rpim | 0.075 | 0.771 |
Number of reflections | 76050 | 26943 |
<I/σ(I)> | 10.1 | |
Completeness [%] | 99.8 | 99.9 |
Redundancy | 5.8 | 6 |
CC(1/2) | 0.996 | 0.581 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7.5 | 291 | 12% PEG 3350, 0.1 M Bis-Tris propane pH 8.5, 0.2 M NaNO3, 2% MPD, 8 mM n-Nonyl-b-D-thiomaltoside. The crystals were enhanced by the microseeding technique. |