Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

6S5S

Cfucosylated second generation peptide dendrimer SBD8 bound to Fucose binding Lectin LecB (PA-IIL) from Pseudomonas aeruginosa at 1.43 Angstrom resolution

Experimental procedure
Experimental methodMAD
Source typeSYNCHROTRON
Source detailsSLS BEAMLINE X06DA
Synchrotron siteSLS
BeamlineX06DA
Temperature [K]80
Detector technologyPIXEL
Collection date2018-07-06
DetectorDECTRIS PILATUS 2M-F
Wavelength(s)1.000033
Spacegroup nameP 6 2 2
Unit cell lengths106.297, 106.297, 57.090
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution48.517 - 1.433
R-factor0.1636
Rwork0.163
R-free0.17850
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)1oxc
RMSD bond length0.017
RMSD bond angle1.564
Data reduction softwareXDS
Data scaling softwareXSCALE
Phasing softwarePHASER (2.8.1)
Refinement softwarePHENIX (1.11.1_2575)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]48.5171.440
High resolution limit [Å]1.4331.433
Rmeas0.1700.207
Number of reflections6604210408
<I/σ(I)>14.80.73
Completeness [%]99.599.7
Redundancy17.15.5
CC(1/2)0.9990.247
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP6.52910.1 M BIS-TRIS pH 6.5, 3.0 M Sodium chloride

219140

PDB entries from 2024-05-01

PDB statisticsPDBj update infoContact PDBjnumon