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6S4D

Crystal Structure of the Homospermidine Synthase (HSS) variant W229F from Blastochloris viridis in Complex with NAD

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsPETRA III, EMBL c/o DESY BEAMLINE P14 (MX2)
Synchrotron sitePETRA III, EMBL c/o DESY
BeamlineP14 (MX2)
Temperature [K]100
Detector technologyPIXEL
Collection date2017-11-30
DetectorDECTRIS EIGER X 16M
Wavelength(s)0.9763
Spacegroup nameP 2 21 21
Unit cell lengths60.110, 110.009, 158.163
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution90.312 - 1.800
R-factor0.1751
Rwork0.173
R-free0.20790
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)4plp
RMSD bond length0.010
RMSD bond angle0.847
Data reduction softwareXDS
Data scaling softwareSCALA
Phasing softwarePHENIX
Refinement softwarePHENIX ((1.13_2998: ???))
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]90.3121.600
High resolution limit [Å]1.5701.570
Rmeas0.325
Number of reflections1345271408
<I/σ(I)>4.4
Completeness [%]91.6
Redundancy6.8
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP4.8291Sodium acetate, Ammonium acetate, PEG 10000, NDSB-201, Agmatine sulfate

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