6S3N
Crystal structure of helicase Pif1 from Thermus oshimai in complex with ssDNA (dT)18 and ADP-VO4
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL19U1 |
Synchrotron site | SSRF |
Beamline | BL19U1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2017-06-08 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.9789 |
Spacegroup name | C 2 2 21 |
Unit cell lengths | 88.093, 102.955, 249.697 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 44.047 - 2.533 |
R-factor | 0.201 |
Rwork | 0.198 |
R-free | 0.25530 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5ftd |
RMSD bond length | 0.003 |
RMSD bond angle | 0.773 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | PHENIX ((1.14rc1_3177: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 44.050 | 2.624 |
High resolution limit [Å] | 2.533 | 2.533 |
Rmerge | 0.122 | 0.730 |
Rmeas | 0.132 | 0.784 |
Rpim | 0.049 | 0.265 |
Number of reflections | 36510 | 3756 |
<I/σ(I)> | 10.44 | 2.26 |
Completeness [%] | 95.5 | 99.71 |
Redundancy | 7.1 | 7.5 |
CC(1/2) | 0.994 | 0.929 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7.5 | 298 | Osdium Hepes-MOPS 0.1M NaF 0.03M NaI 0.03M NaBr 0.03M PEG 4K 20% Glycerol 20% |