6S3M
Crystal structure of helicase Pif1 from Thermus oshimai in complex with ssDNA (dT)18 and ADP-AlF4
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL19U1 |
Synchrotron site | SSRF |
Beamline | BL19U1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2017-06-08 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.9791 |
Spacegroup name | C 2 2 21 |
Unit cell lengths | 87.735, 101.974, 250.925 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 43.540 - 2.113 |
R-factor | 0.2263 |
Rwork | 0.224 |
R-free | 0.26840 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5ftd |
RMSD bond length | 0.007 |
RMSD bond angle | 0.889 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | PHENIX ((1.14rc1_3177: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 43.540 | 2.189 |
High resolution limit [Å] | 2.113 | 2.113 |
Rmerge | 0.095 | 0.788 |
Rmeas | 0.103 | 0.849 |
Rpim | 0.039 | 0.313 |
Number of reflections | 60373 | 6394 |
<I/σ(I)> | 12.97 | 2.5 |
Completeness [%] | 93.2 | 100 |
Redundancy | 7 | 7.3 |
CC(1/2) | 0.997 | 0.830 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6.5 | 298 | MES-imidazole 0.1M PEG 4K 8% Ethylene glycol 1.25% Glycerol 16% |