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6S33

Ligand binding domain of the P. putida receptor PcaY_PP in complex with Protocatechuate

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsESRF BEAMLINE ID30B
Synchrotron siteESRF
BeamlineID30B
Temperature [K]100
Detector technologyPIXEL
Collection date2017-03-04
DetectorDECTRIS PILATUS3 6M
Wavelength(s)0.976
Spacegroup nameP 21 21 21
Unit cell lengths44.886, 67.714, 94.461
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution40.540 - 1.560
R-factor0.1695
Rwork0.168
R-free0.19760
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)6s18
RMSD bond length0.006
RMSD bond angle0.789
Data reduction softwareXDS
Data scaling softwareAimless
Phasing softwareREFMAC
Refinement softwarePHENIX ((1.13_2998: ???))
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]40.5401.616
High resolution limit [Å]1.5601.560
Rmerge0.0610.990
Rmeas0.0691.150
Rpim0.0310.560
Number of reflections405993956
<I/σ(I)>11.291.09
Completeness [%]97.196.42
Redundancy4.13.6
CC(1/2)0.9990.507
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1COUNTER-DIFFUSION6.529330% PEG 8K, 0.1M Na Acetate, 0.1M Na-Cacodylate pH 6.50

222036

PDB entries from 2024-07-03

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