6S1A
Ligand binding domain of the P. putida receptor PcaY_PP
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE ID23-1 |
Synchrotron site | ESRF |
Beamline | ID23-1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2017-11-02 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.9763 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 42.519, 69.228, 90.805 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 38.507 - 2.112 |
R-factor | 0.2145 |
Rwork | 0.212 |
R-free | 0.26030 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6s18 |
RMSD bond length | 0.004 |
RMSD bond angle | 0.578 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | MOLREP |
Refinement software | PHENIX ((1.14_3260: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 38.510 | 2.190 |
High resolution limit [Å] | 2.110 | 2.110 |
Rmerge | 0.062 | 0.473 |
Rmeas | 0.070 | 0.540 |
Number of reflections | 14061 | 1487 |
<I/σ(I)> | 12.68 | 2.63 |
Completeness [%] | 88.0 | 96 |
Redundancy | 4 | 4 |
CC(1/2) | 0.999 | 0.841 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | COUNTER-DIFFUSION | 8.5 | 293.5 | 2.0M NH4 Sulphate,0.1M Tris-HCl pH 8.50 |