6RXL
Crystal structure of CobB wt in complex with H4K16-Crotonyl peptide
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SLS BEAMLINE X10SA |
Synchrotron site | SLS |
Beamline | X10SA |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2018-11-24 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 1.00000 |
Spacegroup name | P 41 21 2 |
Unit cell lengths | 93.960, 93.960, 58.540 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 46.980 - 2.300 |
R-factor | 0.2155 |
Rwork | 0.211 |
R-free | 0.25020 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | pdbid 1S5P |
RMSD bond length | 0.003 |
RMSD bond angle | 0.762 |
Data reduction software | XDS (VERSION JAN 31, 2018) |
Data scaling software | XSCALE (VERSION JAN 31, 2018) |
Phasing software | PHASER (2.5.6) |
Refinement software | PHENIX (1.9_1692) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 46.980 | 46.980 | 2.360 |
High resolution limit [Å] | 2.300 | 10.290 | 2.300 |
Rmerge | 0.098 | 0.049 | 1.749 |
Rmeas | 0.100 | 0.051 | 1.785 |
Total number of observations | 310153 | ||
Number of reflections | 12129 | 170 | 881 |
<I/σ(I)> | 23.91 | 65.69 | 2.51 |
Completeness [%] | 100.0 | 98.8 | 100 |
Redundancy | 25.571 | 19.129 | 25.7 |
CC(1/2) | 0.999 | 0.999 | 0.816 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7 | 291 | 0.1 M Bis-Tris 22% PEG 3350 0.03 M HCl |