6RXK
Crystal structure of CobB wt in complex with H4K16-Butyryl peptide
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SLS BEAMLINE X10SA |
Synchrotron site | SLS |
Beamline | X10SA |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2018-11-24 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 1.00000 |
Spacegroup name | P 41 21 2 |
Unit cell lengths | 92.730, 92.730, 58.620 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 46.365 - 1.350 |
R-factor | 0.1704 |
Rwork | 0.170 |
R-free | 0.18790 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | pdbid 1S5P |
RMSD bond length | 0.012 |
RMSD bond angle | 1.417 |
Data reduction software | XDS (VERSION JAN 31, 2018) |
Data scaling software | XSCALE (VERSION JAN 31, 2018) |
Phasing software | PHENIX (1.9_1692) |
Refinement software | PHENIX (1.9_1692) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 46.365 | 46.365 | 1.390 |
High resolution limit [Å] | 1.350 | 6.040 | 1.350 |
Rmerge | 0.090 | 0.063 | 2.586 |
Rmeas | 0.092 | 0.064 | 2.638 |
Total number of observations | 1435397 | ||
Number of reflections | 57070 | 746 | 4152 |
<I/σ(I)> | 18.96 | 54.19 | 1.56 |
Completeness [%] | 100.0 | 99.7 | 99.9 |
Redundancy | 25.152 | 24.201 | 25.597 |
CC(1/2) | 0.999 | 0.999 | 0.626 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7 | 293 | 22% PEG 3350 0.1M Bis-Tris 0.03 mM HCL |