6RXC
Leishmania major pteridine reductase 1 (LmPTR1) in complex with inhibitor 4 (NMT-C0026)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I03 |
Synchrotron site | Diamond |
Beamline | I03 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2015-10-04 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 1.00000 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 95.267, 103.445, 136.749 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 82.500 - 2.100 |
R-factor | 0.21586 |
Rwork | 0.213 |
R-free | 0.26082 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5l4n |
RMSD bond length | 0.011 |
RMSD bond angle | 1.923 |
Data reduction software | MOSFLM |
Data scaling software | SCALA |
Phasing software | MOLREP |
Refinement software | REFMAC (5.8.0238) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 82.500 | 2.210 |
High resolution limit [Å] | 2.100 | 2.100 |
Rmerge | 0.110 | 0.383 |
Rmeas | 0.124 | 0.434 |
Rpim | 0.057 | 0.200 |
Number of reflections | 78229 | 11390 |
<I/σ(I)> | 8.2 | 3.6 |
Completeness [%] | 98.7 | 99.4 |
Redundancy | 4.5 | 4.5 |
CC(1/2) | 0.990 | 0.836 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 5.3 | 293 | Protein solution: 12.5 mg/mL in 20 mM Sodium Acetate pH 5.3 and 10 mM DTT; Crystallization buffer: 12% PEG4600, 100 mM Sodium Acetate pH 5.5 and 120-160 mM Calcium Acetate |