6RU1
Crystal Structure of Glucuronoyl Esterase from Cerrena unicolor inactive S270A variant in complex with the aldouronic acid Um4X
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PETRA III, EMBL c/o DESY BEAMLINE P13 (MX1) |
Synchrotron site | PETRA III, EMBL c/o DESY |
Beamline | P13 (MX1) |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2018-07-16 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 0.97625 |
Spacegroup name | P 41 21 2 |
Unit cell lengths | 84.240, 84.240, 260.815 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 42.120 - 1.390 |
R-factor | 0.1632 |
Rwork | 0.163 |
R-free | 0.17680 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6rtv |
Data reduction software | XDS |
Data scaling software | Aimless (0.7.3) |
Phasing software | PHASER |
Refinement software | PHENIX (1.13_2998) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 49.140 | 49.140 | 1.410 |
High resolution limit [Å] | 1.390 | 7.610 | 1.390 |
Rmerge | 0.099 | 0.032 | 1.002 |
Rmeas | 0.107 | 0.034 | 1.078 |
Rpim | 0.038 | 0.012 | 0.385 |
Total number of observations | 1377160 | 9165 | 65963 |
Number of reflections | 188224 | 1299 | 9124 |
<I/σ(I)> | 11 | 39.7 | 1.8 |
Completeness [%] | 99.6 | 95 | 98.7 |
Redundancy | 7.3 | 7.1 | 7.2 |
CC(1/2) | 0.998 | 0.999 | 0.692 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 277 | 0.1 M HEPES pH 7, 0.1 M KCl, 25% w/v SOKALAN CP7 |