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6RTX

Crystal structure of the Patched-1 (PTCH1) ectodomain 1

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsDIAMOND BEAMLINE I04
Synchrotron siteDiamond
BeamlineI04
Temperature [K]100
Detector technologyPIXEL
Collection date2016-12-15
DetectorDECTRIS PILATUS 6M
Wavelength(s)0.97950
Spacegroup nameP 21 21 21
Unit cell lengths49.170, 65.680, 100.280
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution50.140 - 1.950
R-factor0.19929
Rwork0.196
R-free0.25696
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)6rty
RMSD bond length0.008
RMSD bond angle1.429
Data reduction softwarexia2
Data scaling softwareAimless
Phasing softwarePHASER
Refinement softwareREFMAC (5.8.0238)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]50.1401.990
High resolution limit [Å]1.9501.950
Rmerge0.129
Rpim0.0550.525
Number of reflections242821168
<I/σ(I)>10.71.4
Completeness [%]100.099.1
Redundancy6.45.7
CC(1/2)0.9980.316
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP8.52930.1 M bicine/Trizma base pH 8.5, 0.03M of each ethylene glycol (diethyleneglycol, triethyleneglycol, tetraethyleneglycol and pentaethyleneglycol), 12.5% (v/v) MPD, 12.5% (w/v) PEG 1000, 12.5% (w/v) PEG 3350

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