6RTX
Crystal structure of the Patched-1 (PTCH1) ectodomain 1
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | DIAMOND BEAMLINE I04 |
| Synchrotron site | Diamond |
| Beamline | I04 |
| Temperature [K] | 100 |
| Detector technology | PIXEL |
| Collection date | 2016-12-15 |
| Detector | DECTRIS PILATUS 6M |
| Wavelength(s) | 0.97950 |
| Spacegroup name | P 21 21 21 |
| Unit cell lengths | 49.170, 65.680, 100.280 |
| Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
| Resolution | 50.140 - 1.950 |
| R-factor | 0.19929 |
| Rwork | 0.196 |
| R-free | 0.25696 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 6rty |
| RMSD bond length | 0.008 |
| RMSD bond angle | 1.429 |
| Data reduction software | xia2 |
| Data scaling software | Aimless |
| Phasing software | PHASER |
| Refinement software | REFMAC (5.8.0238) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 50.140 | 1.990 |
| High resolution limit [Å] | 1.950 | 1.950 |
| Rmerge | 0.129 | |
| Rpim | 0.055 | 0.525 |
| Number of reflections | 24282 | 1168 |
| <I/σ(I)> | 10.7 | 1.4 |
| Completeness [%] | 100.0 | 99.1 |
| Redundancy | 6.4 | 5.7 |
| CC(1/2) | 0.998 | 0.316 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, SITTING DROP | 8.5 | 293 | 0.1 M bicine/Trizma base pH 8.5, 0.03M of each ethylene glycol (diethyleneglycol, triethyleneglycol, tetraethyleneglycol and pentaethyleneglycol), 12.5% (v/v) MPD, 12.5% (w/v) PEG 1000, 12.5% (w/v) PEG 3350 |






