6RT2
Crystal structure of Trypanosoma Brucei PEX14 N-terminal domain in complex with small molecules designed to investigate the water envelope
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PETRA III, DESY BEAMLINE P11 |
Synchrotron site | PETRA III, DESY |
Beamline | P11 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2017-04-14 |
Detector | DECTRIS PILATUS 6M-F |
Wavelength(s) | 1 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 35.780, 115.520, 38.870 |
Unit cell angles | 90.00, 101.39, 90.00 |
Refinement procedure
Resolution | 20.000 - 1.300 |
R-factor | 0.1627 |
Rwork | 0.161 |
R-free | 0.18890 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5aon |
RMSD bond length | 0.037 |
RMSD bond angle | 3.125 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0135) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 20.000 | 20.000 | 1.350 |
High resolution limit [Å] | 1.300 | 10.000 | 1.300 |
Rmerge | 0.028 | 0.021 | 0.468 |
Rmeas | 0.035 | 0.026 | 0.577 |
Total number of observations | 365510 | ||
Number of reflections | 145521 | 327 | 15874 |
<I/σ(I)> | 14.55 | 41.27 | 1.81 |
Completeness [%] | 96.8 | 95.1 | 98.4 |
Redundancy | 2.512 | 2.56 | 2.406 |
CC(1/2) | 0.999 | 0.998 | 0.824 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 298 | 0.2M Na2SO4, 0.1 M Bis-Tris propane pH 7.5, 20% (w/v) PEG 3350 |