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6RSO

Structure of [Ru(phen)2(10-NO2-dppz)]2+ bound to the DNA sequence d(TCGGCGCCGA)

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsDIAMOND BEAMLINE I03
Synchrotron siteDiamond
BeamlineI03
Temperature [K]100
Detector technologyPIXEL
Collection date2019-02-18
DetectorDECTRIS PILATUS3 S 6M
Wavelength(s)0.9762
Spacegroup nameP 43
Unit cell lengths46.730, 46.730, 31.990
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution26.397 - 1.970
R-factor0.209
Rwork0.207
R-free0.24740
Structure solution methodSAD
RMSD bond length0.008
RMSD bond angle0.868
Data reduction softwarexia2
Data scaling softwarexia2
Phasing softwarePHASER
Refinement softwarePHENIX ((1.15rc2_3433: ???))
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]46.7302.000
High resolution limit [Å]1.9701.970
Rmerge0.049
Rmeas0.051
Rpim0.0140.804
Number of reflections9539246
<I/σ(I)>26.91
Completeness [%]100.099.6
Redundancy12.9
CC(1/2)1.0000.334
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP72938 uL drop containing; 250 uM d(TCGGCGCCGA), 625 uM rac-[Ru(phen)2(10-NO2-dppz)]Cl2, 7.5% v/v MPD, 30 mM pH 7 sodium cacodylate, 9 mM spermine tetrahydrochloride, 60 mM KCl and 15 mM BaCl2, all equilibrated against 500 uL of 35% v/v MPD

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PDB entries from 2024-08-07

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