6RPU
Structure of the ternary complex of the IMPDH enzyme from Ashbya gossypii bound to the dinucleoside polyphosphate Ap5G and GDP
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ALBA BEAMLINE XALOC |
Synchrotron site | ALBA |
Beamline | XALOC |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2016-11-27 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.97725 |
Spacegroup name | I 4 2 2 |
Unit cell lengths | 148.538, 148.538, 103.828 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 85.099 - 2.110 |
R-factor | 0.255 |
Rwork | 0.254 |
R-free | 0.28350 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5tc3 |
RMSD bond length | 0.012 |
RMSD bond angle | 1.112 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | PHENIX ((1.15rc1_3420: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 85.099 | 2.257 |
High resolution limit [Å] | 2.107 | 2.107 |
Rmerge | 0.093 | 2.409 |
Rmeas | 0.095 | 2.463 |
Rpim | 0.020 | 0.507 |
Number of reflections | 22408 | 1106 |
<I/σ(I)> | 21.5 | 1.7 |
Completeness [%] | 95.8 | 68.4 |
Redundancy | 23.3 | 23.4 |
CC(1/2) | 0.999 | 0.704 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 295 | 0.2 M Sodium Chloride, 0.1 M Sodium acetate, 20% (w/v) PEG6000 |