6RP4
CDT of SidD, deAMPylase from Legionella pneumophila
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE ID29 |
Synchrotron site | ESRF |
Beamline | ID29 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2012-07-18 |
Detector | DECTRIS PILATUS3 S 6M |
Wavelength(s) | 0.933400 |
Spacegroup name | P 63 |
Unit cell lengths | 165.579, 165.579, 68.712 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 47.799 - 2.500 |
R-factor | 0.2717 |
Rwork | 0.263 |
R-free | 0.29610 |
Structure solution method | SIRAS |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | SHARP |
Refinement software | PHENIX (1.13_2998) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 47.799 | 47.799 | 2.640 |
High resolution limit [Å] | 2.490 | 7.380 | 2.490 |
Rmerge | 0.096 | 0.025 | 1.912 |
Rmeas | 0.101 | 0.026 | 2.001 |
Total number of observations | 432311 | ||
Number of reflections | 37987 | 1521 | 6078 |
<I/σ(I)> | 21.76 | 75.47 | 1.51 |
Completeness [%] | 99.8 | 99.1 | 99.4 |
Redundancy | 11.38 | 10.341 | 11.359 |
CC(1/2) | 1.000 | 1.000 | 0.585 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 4.6 | 291 | 2.0M NaCl, 0.1M sodium acetate (pH 4.6) and 20% glycerol. |