6RNX
Crystal structure of the essential repressor DdrO from radiation-resistant Deinococcus bacteria (Deinococcus deserti)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE ID23-2 |
Synchrotron site | ESRF |
Beamline | ID23-2 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2015-04-16 |
Detector | DECTRIS PILATUS3 X 2M |
Wavelength(s) | 0.8726 |
Spacegroup name | C 2 2 21 |
Unit cell lengths | 32.902, 130.188, 154.766 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 49.810 - 2.840 |
R-factor | 0.2258 |
Rwork | 0.222 |
R-free | 0.29580 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6rmq |
RMSD bond length | 0.011 |
RMSD bond angle | 1.194 |
Data reduction software | XDS |
Data scaling software | SCALA |
Phasing software | MOLREP |
Refinement software | PHENIX (1.16_3549) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 2.940 |
High resolution limit [Å] | 2.840 | 2.840 |
Rmerge | 0.159 | |
Number of reflections | 8234 | 764 |
<I/σ(I)> | 8.6 | |
Completeness [%] | 99.0 | |
Redundancy | 9.6 | |
CC(1/2) | 0.770 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 293 | Bis-Tris pH 5.5, 0.2 M Na-thiocyanate, 2.3 M NaCl |