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6RNX

Crystal structure of the essential repressor DdrO from radiation-resistant Deinococcus bacteria (Deinococcus deserti)

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsESRF BEAMLINE ID23-2
Synchrotron siteESRF
BeamlineID23-2
Temperature [K]100
Detector technologyPIXEL
Collection date2015-04-16
DetectorDECTRIS PILATUS3 X 2M
Wavelength(s)0.8726
Spacegroup nameC 2 2 21
Unit cell lengths32.902, 130.188, 154.766
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution49.810 - 2.840
R-factor0.2258
Rwork0.222
R-free0.29580
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)6rmq
RMSD bond length0.011
RMSD bond angle1.194
Data reduction softwareXDS
Data scaling softwareSCALA
Phasing softwareMOLREP
Refinement softwarePHENIX (1.16_3549)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]50.0002.940
High resolution limit [Å]2.8402.840
Rmerge0.159
Number of reflections8234764
<I/σ(I)>8.6
Completeness [%]99.0
Redundancy9.6
CC(1/2)0.770
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP293Bis-Tris pH 5.5, 0.2 M Na-thiocyanate, 2.3 M NaCl

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PDB entries from 2024-06-26

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