6RMS
The Structure of variant D274E of the Mo-insertase domain Cnx1E from Arabidopsis thaliana in complex with AMP
Refinement Statistics
Experimental method: SOLUTION SCATTERING, X-RAY DIFFRACTION (1.74 Å)
Cell axes | 64.836 | 119.480 | 136.867 |
Cell angles | 90.00 | 90.00 | 90.00 |
Spacegroup | I 2 2 2 | ||
Resolution limits | 23.54 - 1.74 |
Crystallization Conditions
crystal ID | method | pH | pH range | temperature | unit |
1 | VAPOR DIFFUSION, SITTING DROP | 6.5 | 293 |
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PETRA III, DESY BEAMLINE P11 |
Synchrotron site | PETRA III, DESY |
Beamline | P11 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2018-07-12 |
Detector | DECTRIS PILATUS 6M-F |
Wavelength(s) | 0.9537 |
Spacegroup name | I 2 2 2 |
Unit cell lengths | 64.836, 119.480, 136.867 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 23.540 - 1.740 |
R-factor | 0.202 |
Rwork | 0.201 |
R-free | 0.22000 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6etd |
RMSD bond length | 0.010 |
RMSD bond angle | 1.070 |
Data reduction software | XDS (VERSION Jan 26, 2018) |
Data scaling software | autoPROC (1.0.5) |
Phasing software | BUSTER (2.10.3) |
Refinement software | BUSTER (2.10.3) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 90.009 | 1.905 |
High resolution limit [Å] | 1.740 | 1.745 |
Rmerge | 0.057 | 1.605 |
Rmeas | 0.062 | 1.738 |
Rpim | 0.023 | 0.663 |
Number of reflections | 34702 | 1736 |
<I/σ(I)> | 25.6 | 1.5 |
Completeness [%] | 65.7 | 16 |
Redundancy | 13.2 | 13 |
CC(1/2) | 1.000 | 0.639 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6.5 | 293 | 0.12 M 1,6-Hexanediol; 0.12 M 1-Butanol; 0.12 M 1,2-Propanediol (racemic); 0.12 M 2-Propanol; 0.12 M 1,4-Butanediol; 0.12 M 1,3-Propanediol; 30% (v/v) glycerol; 30% (w/v) PEG 4000; 0.1 M imidazole; 0.1 M MES; pH 6.5 |