6RLM
Crystal structure of AT1412dm Fab fragment
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE ID29 |
Synchrotron site | ESRF |
Beamline | ID29 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2017-03-21 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.97 |
Spacegroup name | C 2 2 21 |
Unit cell lengths | 224.909, 238.594, 209.812 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 163.660 - 2.500 |
R-factor | 0.2436 |
Rwork | 0.242 |
R-free | 0.26700 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5i1d |
RMSD bond length | 0.007 |
RMSD bond angle | 1.482 |
Data reduction software | DIALS |
Data scaling software | Aimless (0.6.3) |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0238) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 163.660 | 163.660 | 2.540 |
High resolution limit [Å] | 2.500 | 13.690 | 2.500 |
Rmerge | 0.143 | 0.057 | 3.138 |
Rmeas | 0.156 | 0.069 | 3.538 |
Rpim | 0.061 | 0.037 | 1.594 |
Total number of observations | 1251551 | 7907 | 41700 |
Number of reflections | 192872 | 1315 | 9123 |
<I/σ(I)> | 7 | 23.2 | 0.5 |
Completeness [%] | 99.7 | 100 | 96.1 |
Redundancy | 6.5 | 6 | 4.6 |
CC(1/2) | 0.845 | 0.587 | 0.230 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 8.5 | 277.15 | PEG 400, potassium chloride, TRIS |