6RK6
Characterization of an intertidal zone metagenome oligoribonuclease and the role of the intermolecular disulfide bond for homodimer formation and nuclease activity.
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | BESSY BEAMLINE 14.1 |
Synchrotron site | BESSY |
Beamline | 14.1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2016-04-14 |
Detector | DECTRIS PILATUS3 S 6M |
Wavelength(s) | 0.91841 |
Spacegroup name | P 31 2 1 |
Unit cell lengths | 108.322, 108.322, 101.334 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 44.580 - 3.150 |
R-factor | 0.2467 |
Rwork | 0.245 |
R-free | 0.26550 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2gbz |
RMSD bond length | 0.003 |
RMSD bond angle | 0.678 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | PHENIX ((1.12_2829: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 44.580 | 3.370 |
High resolution limit [Å] | 3.150 | 3.150 |
Rpim | 0.076 | 0.551 |
Number of reflections | 12264 | 2200 |
<I/σ(I)> | 8.2 | 1.6 |
Completeness [%] | 99.9 | 100 |
Redundancy | 5.2 | 5.1 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7 | 277 | 0.1 M Hepes, pH 7.0, 5% (v/v) PEG 8000. |