6R99
Crystal Structure of Human CLN protein 5 (Ceroid Lipofuscinosis Neuronal Protein 5)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SLS BEAMLINE X10SA |
Synchrotron site | SLS |
Beamline | X10SA |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2018-07-08 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.979 |
Spacegroup name | P 32 2 1 |
Unit cell lengths | 58.420, 58.420, 179.050 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 44.046 - 2.700 |
R-factor | 0.222 |
Rwork | 0.221 |
R-free | 0.24710 |
Structure solution method | SAD |
RMSD bond length | 0.004 |
RMSD bond angle | 0.727 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | SHELXDE |
Refinement software | PHENIX |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 44.046 | 44.046 | 2.720 |
High resolution limit [Å] | 2.650 | 11.860 | 2.650 |
Rmerge | 0.229 | 0.078 | 1.294 |
Rmeas | 0.233 | 0.079 | 1.362 |
Total number of observations | 550105 | ||
Number of reflections | 19772 | 217 | 1412 |
<I/σ(I)> | 13.53 | 46.16 | 1.55 |
Completeness [%] | 100.0 | 99.1 | 100 |
Redundancy | 27.822 | 33.401 | 10.176 |
CC(1/2) | 0.999 | 1.000 | 0.759 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 293 | PEG 3350, magnesium nitrate |