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6R6D

[Ru(TAP)2(11,12-CN2-dppz)]2+ bound to d(TCGGCGCCGA)2

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsDIAMOND BEAMLINE I03
Synchrotron siteDiamond
BeamlineI03
Temperature [K]100
Detector technologyPIXEL
Collection date2019-02-18
DetectorDECTRIS PILATUS3 S 6M
Wavelength(s)0.9763
Spacegroup nameP 43 21 2
Unit cell lengths46.704, 46.704, 34.308
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution33.025 - 1.838
R-factor0.179
Rwork0.179
R-free0.18660
Structure solution methodSAD
RMSD bond length0.011
RMSD bond angle1.150
Data reduction softwarexia2
Data scaling softwareAimless
Phasing softwarePHASER
Refinement softwarePHENIX ((1.15rc2_3433: ???))
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]34.3101.870
High resolution limit [Å]1.8381.840
Rmerge0.097
Rmeas0.100
Rpim0.021
Number of reflections6316180
<I/σ(I)>17.7
Completeness [%]100.098.9
Redundancy23.524.5
CC(1/2)0.999
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP72921uL 1mM dsDNA, 1ul 5mM rac[Ru(TAP)2(11,12-CN2-dppz)]2+, 6ul of a solution containing 10% (v/v) 2-methyl-2,4-pentanediol, 80mM NaCl, 20mM Na-cacodylate pH 7, 20mM BaCl2 and 12mM spermine tetra-HCl equilibrated against 500uL 35% 2-methyl-2,4-pentanediol.

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PDB entries from 2024-07-31

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