6R3I
Aspergillus niger ferulic acid decarboxylase (Fdc) E282Q variant in complex with the covalent adduct formed between prFMN cofactor and pentafluorocinnamic acid (Int2)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I03 |
Synchrotron site | Diamond |
Beamline | I03 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2018-08-04 |
Detector | DECTRIS PILATUS 300K |
Wavelength(s) | 0.976 |
Spacegroup name | P 21 21 2 |
Unit cell lengths | 96.196, 64.079, 87.508 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 64.730 - 1.140 |
R-factor | 0.12577 |
Rwork | 0.125 |
R-free | 0.14599 |
Structure solution method | FOURIER SYNTHESIS |
Starting model (for MR) | 4za9 |
RMSD bond length | 0.033 |
RMSD bond angle | 2.525 |
Data reduction software | xia2 |
Data scaling software | xia2 |
Refinement software | REFMAC (5.8.0189) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 64.730 | 1.180 |
High resolution limit [Å] | 1.140 | 1.140 |
Number of reflections | 195884 | 19153 |
<I/σ(I)> | 9.05 | 2.09 |
Completeness [%] | 99.6 | 98.3 |
Redundancy | 4.8 | |
CC(1/2) | 0.997 | 0.785 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 277 | 0.2 M POTASSIUM THIOCYANATE, BIS-TRIS PROPANE 6.5, 20 % W/V PEG 3350 |