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6R02

Psychrobacter arcticus ATP phosphoribosyltransferase bound to histidine and PRPP

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsDIAMOND BEAMLINE I24
Synchrotron siteDiamond
BeamlineI24
Temperature [K]100
Detector technologyPIXEL
Collection date2019-01-13
DetectorDECTRIS PILATUS3 6M
Wavelength(s)0.9686
Spacegroup nameP 1 21 1
Unit cell lengths93.253, 147.310, 99.327
Unit cell angles90.00, 103.11, 90.00
Refinement procedure
Resolution77.310 - 2.650
R-factor0.2376
Rwork0.236
R-free0.27010
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)6ftt
RMSD bond length0.004
RMSD bond angle1.286
Data reduction softwareXDS
Data scaling softwareAimless (0.7.3)
Phasing softwareMOLREP
Refinement softwareREFMAC (refmac_5.8.0238)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]77.31077.3102.700
High resolution limit [Å]2.65013.2502.650
Rmerge0.0720.0301.247
Rmeas0.0860.0371.482
Rpim0.0470.0210.794
Number of reflections757156104488
<I/σ(I)>6.5
Completeness [%]99.995.499.8
Redundancy3.42.93.4
CC(1/2)0.9980.9960.456
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP8.52778mg mL-1 protein (in 20mM Tris pH7, 50mM KCl, 10mM MgCl2, 2mM DTT, 0.5mM histidine) mixed in 1:1 ratio with precipitant solution (11% PEG3350, 100mM bicine pH8.5, 150mM SrCl2, 150mM KBr, 2% 1,6-hexanediol)

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PDB entries from 2024-05-01

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