6QZO
Crystal structure of DyP-type peroxidase from Cellulomonas bogoriensis
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | BRUKER AXS MICROSTAR-H |
Temperature [K] | 110 |
Detector technology | IMAGE PLATE |
Collection date | 2018-08-28 |
Detector | MARRESEARCH |
Wavelength(s) | 1.54 |
Spacegroup name | P 62 |
Unit cell lengths | 173.989, 173.989, 283.003 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 58.870 - 2.400 |
R-factor | 0.24334 |
Rwork | 0.242 |
R-free | 0.26718 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5jxu |
RMSD bond length | 0.007 |
RMSD bond angle | 1.476 |
Data reduction software | iMOSFLM |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0238) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 58.900 | 2.440 |
High resolution limit [Å] | 2.400 | 2.400 |
Rpim | 0.119 | 0.569 |
Number of reflections | 184630 | 9000 |
<I/σ(I)> | 7 | 1.5 |
Completeness [%] | 97.9 | 96.2 |
Redundancy | 9.9 | 9.8 |
CC(1/2) | 0.985 | 0.463 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 8.5 | 294 | 20% PEG300, 0.1M Tris pH 8.5, 5% PEG8000 and 10% glycerol |