6QWF
The Transcriptional Regulator PrfA-A94V mutant from Listeria Monocytogenes in complex with a 30-bp operator PrfA-box motif
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE ID30B |
Synchrotron site | ESRF |
Beamline | ID30B |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2017-03-03 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 0.96770 |
Spacegroup name | P 43 21 2 |
Unit cell lengths | 78.438, 78.438, 265.444 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 42.557 - 2.700 |
R-factor | 0.2268 |
Rwork | 0.225 |
R-free | 0.26540 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5lej |
RMSD bond length | 0.003 |
RMSD bond angle | 0.509 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | PHENIX ((1.10.1_2155: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 42.560 | 2.800 |
High resolution limit [Å] | 2.700 | 2.700 |
Rmerge | 0.097 | 1.367 |
Rpim | 0.026 | 0.363 |
Number of reflections | 23582 | 2304 |
<I/σ(I)> | 21.2 | 3.2 |
Completeness [%] | 99.9 | 100 |
Redundancy | 26.8 | 28.3 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 8 | 291 | Droplets of 4 microl protein-DNA solution (ratio 1:1.3) in 20 mM Tris-HCl pH 8.0, 50 mM NaCl, and 1 mM EDTA at 6 mg per ml were mixed with 2 microl reservoir solution consisting of 8% PEG 8000, 100 mM sodium citrate pH 4.6, 100 mM Magnesium acetate and 20% glycerol. |