6QVM
Undecaheme cytochrome from S-layer of Carboxydothermus ferrireducens
Experimental procedure
Experimental method | MAD |
Source type | SYNCHROTRON |
Source details | SPRING-8 BEAMLINE BL41XU |
Synchrotron site | SPring-8 |
Beamline | BL41XU |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2016-12-06 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 0.90000, 1.73950 |
Spacegroup name | C 2 2 21 |
Unit cell lengths | 77.679, 193.980, 170.779 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 66.433 - 2.500 |
R-factor | 0.1792 |
Rwork | 0.178 |
R-free | 0.21040 |
Structure solution method | MAD |
RMSD bond length | 0.013 |
RMSD bond angle | 0.979 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | AutoSol |
Refinement software | PHENIX (1.13) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 97.000 | 2.590 |
High resolution limit [Å] | 2.500 | 2.500 |
Rmerge | 0.886 | |
Rmeas | 0.923 | |
Rpim | 0.256 | |
Number of reflections | 45039 | 4370 |
<I/σ(I)> | 13.2 | 3.4 |
Completeness [%] | 99.8 | 100 |
Redundancy | 12 | 12.7 |
CC(1/2) | 0.998 | 0.889 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 8.5 | 277 | 8 % PEG 8000, 0.1 M Tris-HCl pH 8.5 |