Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

6QFY

CRYSTAL STRUCTURE OF PORCINE HEMAGGLUTINATING ENCEPHALOMYELITIS VIRUS SPIKE PROTEIN LECTIN DOMAIN

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsESRF BEAMLINE MASSIF-3
Synchrotron siteESRF
BeamlineMASSIF-3
Temperature [K]100
Detector technologyPIXEL
Collection date2016-02-17
DetectorDECTRIS EIGER X 4M
Wavelength(s)0.9677
Spacegroup nameP 31 2 1
Unit cell lengths112.572, 112.572, 141.441
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution46.130 - 2.970
R-factor0.2198
Rwork0.218
R-free0.25510
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)4h14
RMSD bond length0.005
RMSD bond angle1.383
Data reduction softwareXDS
Data scaling softwareAimless
Phasing softwarePHASER
Refinement softwareREFMAC (5.8.0232)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]97.5003.070
High resolution limit [Å]2.9702.970
Rmerge0.1541.560
Number of reflections204451640
<I/σ(I)>141
Completeness [%]93.579.9
Redundancy7.34.1
CC(1/2)0.9940.462
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP5.5291200 mM MgCl2, 100 mM BisTris 5.5, 25% (w/v) PEG3350

226707

PDB entries from 2024-10-30

PDB statisticsPDBj update infoContact PDBjnumon