6QFY
CRYSTAL STRUCTURE OF PORCINE HEMAGGLUTINATING ENCEPHALOMYELITIS VIRUS SPIKE PROTEIN LECTIN DOMAIN
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE MASSIF-3 |
Synchrotron site | ESRF |
Beamline | MASSIF-3 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2016-02-17 |
Detector | DECTRIS EIGER X 4M |
Wavelength(s) | 0.9677 |
Spacegroup name | P 31 2 1 |
Unit cell lengths | 112.572, 112.572, 141.441 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 46.130 - 2.970 |
R-factor | 0.2198 |
Rwork | 0.218 |
R-free | 0.25510 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4h14 |
RMSD bond length | 0.005 |
RMSD bond angle | 1.383 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0232) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 97.500 | 3.070 |
High resolution limit [Å] | 2.970 | 2.970 |
Rmerge | 0.154 | 1.560 |
Number of reflections | 20445 | 1640 |
<I/σ(I)> | 14 | 1 |
Completeness [%] | 93.5 | 79.9 |
Redundancy | 7.3 | 4.1 |
CC(1/2) | 0.994 | 0.462 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 5.5 | 291 | 200 mM MgCl2, 100 mM BisTris 5.5, 25% (w/v) PEG3350 |