6Q57
X-ray crystal structure of the tetrahydrofolate riboswitch aptamer bound to 5-deazatetrahydropterin
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I23 |
Synchrotron site | Diamond |
Beamline | I23 |
Temperature [K] | 173 |
Detector technology | PIXEL |
Collection date | 2015-12-18 |
Detector | DECTRIS PILATUS3 S 6M |
Wavelength(s) | 1.0 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 26.863, 68.697, 157.309 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 51.741 - 2.720 |
R-factor | 0.2123 |
Rwork | 0.210 |
R-free | 0.24810 |
RMSD bond length | 0.006 |
RMSD bond angle | 0.993 |
Data reduction software | xia2 |
Data scaling software | xia2 |
Phasing software | PHASER |
Refinement software | PHENIX (1.9_1692) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 51.741 | 2.820 |
High resolution limit [Å] | 2.720 | 2.720 |
Number of reflections | 8282 | |
<I/σ(I)> | 6.7 | |
Completeness [%] | 98.0 | |
Redundancy | 6.1 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 303 | 6% 2,4-methyl-pentanediol, 10 mM spermine, 40 mM Na-cacodylate, pH 7.0, 80 mM NaCl and 1 mM DTT |