6Q4E
CDK2 in complex with FragLite33
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I04 |
Synchrotron site | Diamond |
Beamline | I04 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2018-02-19 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.98 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 53.188, 72.431, 71.940 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 51.090 - 1.060 |
R-factor | 0.18034 |
Rwork | 0.179 |
R-free | 0.20514 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1hck |
RMSD bond length | 0.015 |
RMSD bond angle | 1.997 |
Data reduction software | xia2 |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0238) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 72.430 | 1.080 |
High resolution limit [Å] | 1.060 | 1.060 |
Rmerge | 0.110 | 0.500 |
Number of reflections | 107335 | 5293 |
<I/σ(I)> | 9.1 | 0.7 |
Completeness [%] | 84.9 | 5.6 |
Redundancy | 5.6 | 1.1 |
CC(1/2) | 0.990 | 0.760 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7.4 | 293 | 10MG/ML CDK2 10% V/V PEG3350, 50 MM HEPES/NAOH, 50 MM NA/K PHOSPHATE, PH 7.5 |