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6Q2F

Structure of Rhamnosidase from Novosphingobium sp. PP1Y

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSSRL BEAMLINE BL12-2
Synchrotron siteSSRL
BeamlineBL12-2
Temperature [K]100
Detector technologyPIXEL
Collection date2018-07-14
DetectorDECTRIS PILATUS 2M
Wavelength(s)0.979
Spacegroup nameP 2 21 21
Unit cell lengths80.809, 114.570, 158.797
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution39.699 - 2.200
R-factor0.163541015328
Rwork0.163
R-free0.17705
Structure solution methodSAD
RMSD bond length0.010
RMSD bond angle1.027
Data reduction softwareXDS
Data scaling softwareAimless
Phasing softwarePHENIX
Refinement softwarePHENIX (1.10_2155)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]39.7002.250
High resolution limit [Å]2.2002.200
Number of reflections14426229836
<I/σ(I)>14.23.7
Completeness [%]99.9
Redundancy6.7
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP2980.1 M MES, pH 6.8, 6-7% Tascimate pH 5.0, 2-10 mM Tris, pH 7.5, 10 % w/w PEG 20K, 6-10% glycerol, and 0.01% NaN3

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