6PZ7
GH5-4 broad specificity endoglucanase from Clostridium acetobutylicum
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 21-ID-D |
Synchrotron site | APS |
Beamline | 21-ID-D |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2013-10-13 |
Detector | MARMOSAIC 300 mm CCD |
Wavelength(s) | 0.978560 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 51.721, 51.965, 102.995 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 28.640 - 1.250 |
R-factor | 0.1262 |
Rwork | 0.126 |
R-free | 0.14820 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3ndz |
RMSD bond length | 0.010 |
RMSD bond angle | 1.125 |
Data reduction software | XDS (20190315) |
Data scaling software | XSCALE (20190315) |
Refinement software | PHENIX (1.15.2_3472) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 28.650 | 1.295 |
High resolution limit [Å] | 1.250 | 1.250 |
Rmerge | 0.065 | 0.209 |
Rmeas | 0.070 | 0.241 |
Rpim | 0.025 | 0.117 |
Number of reflections | 78485 | 5788 |
<I/σ(I)> | 19.11 | 4.41 |
Completeness [%] | 95.1 | |
Redundancy | 7.3 | |
CC(1/2) | 0.998 | 0.955 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 5 | 293 | Protein was crystallized in SD2 plates set by a Mosquito crystallization robot. The hit came from PACT Premiere Screen A7, 200 mM NaCl, 100 mM sodium acetate pH 5.0, 25% PEG 6K. Crystals were cryopreserved in reservoir solution supplemented with 15% ethylene glycol. |