6PYQ
Assembly of VIQKI D455(beta-L-homoaspartic acid)with human parainfluenza virus type 3 (HPIV3) fusion glycoprotein N-terminal heptad repeat domain
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | APS BEAMLINE 21-ID-G |
| Synchrotron site | APS |
| Beamline | 21-ID-G |
| Temperature [K] | 100 |
| Detector technology | CCD |
| Collection date | 2019-06-08 |
| Detector | MARMOSAIC 300 mm CCD |
| Wavelength(s) | 0.9786 |
| Spacegroup name | P 1 21 1 |
| Unit cell lengths | 39.850, 49.340, 56.180 |
| Unit cell angles | 90.00, 103.61, 90.00 |
Refinement procedure
| Resolution | 24.730 - 1.790 |
| R-factor | 0.2091 |
| Rwork | 0.207 |
| R-free | 0.23210 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 6nro |
| RMSD bond length | 0.015 |
| RMSD bond angle | 1.405 |
| Data reduction software | XDS |
| Data scaling software | XSCALE |
| Phasing software | PHASER |
| Refinement software | PHENIX (1.13_2998) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 24.730 | 1.820 |
| High resolution limit [Å] | 1.790 | 1.790 |
| Rmeas | 0.089 | 2.151 |
| Rpim | 0.031 | 0.732 |
| Number of reflections | 20102 | 1037 |
| <I/σ(I)> | 13.7 | 1 |
| Completeness [%] | 99.8 | 99.71 |
| Redundancy | 8.5 | 8.6 |
| CC(1/2) | 0.999 | 0.395 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, HANGING DROP | 6.5 | 298 | 30 mM sodium nitrate, 30 mM dibasic sodium phosphate, 30 mM ammonium sulfate, 100 mM imidazole/MES monohydrate (pH 6.5), 12.5% PEG1000, 12.5% PEG3350, 12.5% 2-methyl-2,4-pentanediol |






