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6PXS

Crystal structure of iminodiacetate oxidase (IdaA) from Chelativorans sp. BNC1

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsALS BEAMLINE 5.0.1
Synchrotron siteALS
Beamline5.0.1
Temperature [K]100
Detector technologyPIXEL
Collection date2017-10-08
DetectorPSI PILATUS 6M
Wavelength(s)1
Spacegroup nameP 43 21 2
Unit cell lengths113.457, 113.457, 266.119
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution49.842 - 2.836
R-factor0.2191
Rwork0.217
R-free0.24940
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)1ryi
Data reduction softwareHKL-2000
Data scaling softwareHKL-2000
Phasing softwarePHASER
Refinement softwarePHENIX (1.15.2_3472)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]50.00050.0002.850
High resolution limit [Å]2.8007.5902.800
Rmerge0.4790.0555.985
Rmeas0.4990.0576.834
Rpim0.1370.0163.199
Total number of observations548682
Number of reflections4360824342066
<I/σ(I)>2.7
Completeness [%]99.810096.2
Redundancy12.613.24
CC(1/2)0.9990.044
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP2770.1 M tris pH 8.5, 0.2 M trimethylamine N-oxide dihydrate, 20% (w/v) PEG MME 2,000

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