6PSP
Adenylate kinase from Methanococcus igneus - AP5A bound form
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PAL/PLS BEAMLINE 7A (6B, 6C1) |
Synchrotron site | PAL/PLS |
Beamline | 7A (6B, 6C1) |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2017-06-22 |
Detector | ADSC QUANTUM 210 |
Wavelength(s) | 0.997933 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 67.443, 122.627, 83.721 |
Unit cell angles | 90.00, 100.20, 90.00 |
Refinement procedure
Resolution | 33.189 - 2.252 |
R-factor | 0.2167 |
Rwork | 0.215 |
R-free | 0.25560 |
Structure solution method | MOLECULAR REPLACEMENT |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | PHENIX (1.15.2_3472) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 33.189 | 2.390 |
High resolution limit [Å] | 2.250 | 2.250 |
Number of reflections | 227650 | 7203 |
<I/σ(I)> | 10.82 | |
Completeness [%] | 93.4 | 70.8 |
Redundancy | 3.85 | 2.75 |
CC(1/2) | 0.999 | 0.282 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 5 | 293 | 4mM AP5A 17% (w/v) polyethylene 33500, 250 mM sodium malonate |