6PRH
X-ray Crystal Structure of Bacillus subtilis RicA
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRL BEAMLINE BL14-1 |
Synchrotron site | SSRL |
Beamline | BL14-1 |
Temperature [K] | 93 |
Detector technology | CCD |
Collection date | 2016-06-18 |
Detector | MARMOSAIC 325 mm CCD |
Wavelength(s) | 1.18076 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 109.491, 52.212, 27.109 |
Unit cell angles | 90.00, 95.83, 90.00 |
Refinement procedure
Resolution | 29.830 - 2.080 |
R-factor | 0.1849 |
Rwork | 0.183 |
R-free | 0.22410 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2pih |
RMSD bond length | 0.010 |
RMSD bond angle | 1.588 |
Data reduction software | HKL-3000 |
Data scaling software | SCALEPACK |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0232) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 2.120 |
High resolution limit [Å] | 2.080 | 5.640 | 2.080 |
Rmerge | 0.141 | 0.107 | 0.396 |
Rmeas | 0.151 | 0.115 | 0.428 |
Rpim | 0.055 | 0.042 | 0.159 |
Number of reflections | 9208 | 484 | 437 |
<I/σ(I)> | 10.1 | ||
Completeness [%] | 99.8 | 99.6 | 99.1 |
Redundancy | 7.5 | 7.3 | 6.9 |
CC(1/2) | 0.990 | 0.992 | 0.930 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 293 | 100 mM MES pH 6.0, 150 mM NaCl, 65% (vol/vol) MPD |