6PQB
Crystal structure of aminoglycoside-resistance methyltransferase RmtC bound to S-adenosylhomocysteine (SAH)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 22-ID |
Synchrotron site | APS |
Beamline | 22-ID |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2018-06-15 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 0.987 |
Spacegroup name | P 61 |
Unit cell lengths | 163.540, 163.540, 122.550 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 40.885 - 3.140 |
R-factor | 0.2018 |
Rwork | 0.200 |
R-free | 0.23260 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6cn0 |
RMSD bond length | 0.002 |
RMSD bond angle | 0.474 |
Data reduction software | XDS |
Data scaling software | XDS |
Phasing software | PHENIX |
Refinement software | PHENIX (1.11.1_2575) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 41.000 | 3.250 |
High resolution limit [Å] | 3.140 | 3.140 |
Rpim | 0.047 | 0.870 |
Number of reflections | 32552 | 3224 |
<I/σ(I)> | 10.82 | 1.15 |
Completeness [%] | 100.0 | 100 |
Redundancy | 8.7 | 8.2 |
CC(1/2) | 0.990 | 0.419 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7 | 293 | 2M ammonium sulfate, 0.1 M Na HEPES pH 7.0, 3 mM mellitic acid |