6PQ6
The crystal structure of 3-methoxybenzoate-bound CYP199A4
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | AUSTRALIAN SYNCHROTRON BEAMLINE MX1 |
Synchrotron site | Australian Synchrotron |
Beamline | MX1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2018-06-27 |
Detector | ADSC QUANTUM 210r |
Wavelength(s) | 0.9537 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 44.460, 51.380, 78.930 |
Unit cell angles | 90.00, 92.49, 90.00 |
Refinement procedure
Resolution | 39.440 - 1.658 |
R-factor | 0.1568 |
Rwork | 0.155 |
R-free | 0.18530 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5uvb |
RMSD bond length | 0.003 |
RMSD bond angle | 0.701 |
Data reduction software | MOSFLM |
Data scaling software | Aimless (0.6.3) |
Phasing software | PHASER (2.8.2) |
Refinement software | PHENIX |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 43.050 | 43.050 | 1.690 |
High resolution limit [Å] | 1.658 | 9.080 | 1.660 |
Rmerge | 0.095 | 0.060 | 0.662 |
Rmeas | 0.104 | 0.066 | 0.733 |
Rpim | 0.040 | 0.027 | 0.308 |
Total number of observations | 1534 | 9875 | |
Number of reflections | 41800 | 271 | 1925 |
<I/σ(I)> | 12.3 | 28.2 | 2.4 |
Completeness [%] | 98.9 | 96.2 | 94.3 |
Redundancy | 6.3 | 5.7 | 5.1 |
CC(1/2) | 0.997 | 0.995 | 0.832 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7.4 | 289 | 1:1 35-40 mg/mL protein (in 50 mM Tris-HCl, pH 7.4) + reservoir (0.2 M magnesium acetate, 100 mM Bis-Tris buffer adjusted with acetic acid to pH 5.0-5.75, 20-32% w/v PEG3350) |