6PPA
Crystal structure of the unliganded bromodomain of human BRD7
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 22-ID |
Synchrotron site | APS |
Beamline | 22-ID |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2016-04-13 |
Detector | MARMOSAIC 300 mm CCD |
Wavelength(s) | 1.00 |
Spacegroup name | C 2 2 21 |
Unit cell lengths | 71.300, 99.360, 37.830 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 35.650 - 1.770 |
R-factor | 0.1735 |
Rwork | 0.172 |
R-free | 0.20240 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3hme |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | PHENIX (1.14-3260_3260) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 35.650 | 35.650 | 1.820 |
High resolution limit [Å] | 1.770 | 7.920 | 1.770 |
Rmerge | 0.061 | 0.051 | 0.323 |
Rmeas | 0.066 | 0.056 | 0.350 |
Total number of observations | 95652 | ||
Number of reflections | 13502 | 178 | 984 |
<I/σ(I)> | 20.33 | 33.12 | 6.09 |
Completeness [%] | 99.9 | 97.3 | 100 |
Redundancy | 7.084 | 5.601 | 6.958 |
CC(1/2) | 0.998 | 0.998 | 0.967 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7.5 | 291 | 7.5 MG/ML BRD7, 25MM PHOSPHATE PH 6.9, 25MM AMMONIUM SULPHATE, 0.5MM DTT, 25MM BIS-TRIS PH6.5, 15% PENTAERYTHRYTOL ETHOXYLATE 15/4EO/OH |