6PKC
Inhibition of Human Menin by VTP-50469
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 17-ID |
Synchrotron site | APS |
Beamline | 17-ID |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2016-04-18 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 1. |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 58.970, 86.080, 202.040 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 48.650 - 1.900 |
R-factor | 0.17036 |
Rwork | 0.168 |
R-free | 0.20642 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4gpq |
RMSD bond length | 0.020 |
RMSD bond angle | 2.006 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | MOLREP |
Refinement software | REFMAC (5.8.0135) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 58.970 | 1.949 |
High resolution limit [Å] | 1.900 | 1.900 |
Rmerge | 0.052 | 0.300 |
Number of reflections | 81943 | 5650 |
<I/σ(I)> | 19.9 | |
Completeness [%] | 99.9 | 99.97 |
Redundancy | 6.4 | 4.7 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6 | 293 | 14%(w/v) PEG3350 0.2M Potassium thiocyanate 0.1M MES pH=6.0 15%(v/v) Ethylene glycol |